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Technology Developments in Functional Proteomics (Technical Insights)

Published by: Frost & Sullivan

Published: Sep. 30, 2006 - 144 Pages


Table of Contents


1. Executive Summary
        1. Introduction
                  1. Introduction
                  2. Noteworthy Applications
                  3. Market Trends
                  4. Noteworthy Emerging Technologies
        2. Scope and Methodology
                  1. Scope
                  2. Methodology
 
2. Technology and Applications Viewpoint
        1. Technology Primer--Proteomics Technologies
                  1. Proteomics Techniques--General
                  2. Proteomic Techniques--Functional Proteomics
                  3. Functional Proteomic Approaches
                  4. Additional Approaches
        2. Applications Analysis and Trends
                  1. Antibodies as Therapeutics
 
3. Technology Impact Analysis
        1. Assessment of Stakeholder Innovation and Technology Transfer Opportunities
                  1. Introduction
                  2. Noteworthy Innovation at Key Companies
                  3. Noteworthy Innovation at Key Academic and Government-Related Institutions
        2. Influential Market Factors and Industry Trends
                  1. Mergers & Acquisition Activity
                  2. Regulatory and Political or Other Factors
                  3. Industry Trends
 
4. Technology Adoption Factor Analysis
        1. Primary Challenges
                  1. Technology or Product Development Restraints
                  2. Competing Technologies
        2. Analysis of Market Drivers
                  1. Analysis of Funding Sources
                  2. Features and Advantages of Functional Proteomics
                  3. Enabling Technologies
                  4. Adoption Drivers for Functional Proteomics
 
5. Assessment of Innovation and Opportunities
        1. Assessment of Innovation in North America--Companies
                  1. Phosphoprotein Profiling Platform I.D. Cancer-Drug Target
                  2. In Vitro Molecular Imaging Tool Directly Images Protein Biomarkers
                  3. ProteinChip Chromatographic Array System Relates Proteins to Disease
                  4. Microarrays and Gold Balls I.D. Proteins Better than ELISA
                  5. High-Content Screening
                  6. TWEAK Pathway Plays Role in Arthritis
                  7. Tyrosine Kinase Mutant Associated with AML
                  8. Recombinant Proteins with Human Glycosylation From Yeast
                  9. Additional Companies
        2. Assessment of Innovation in North America--Government and Academic Research Institutions
                  1. Multicolor Color BiFC Assays Developed by Purdue University
                  2. Nature’s Most Resilient Nanosprings
                  3. Biosensor Dye Aid Viewing Proteins in Live Cells
                  4. Lab-On-Chip Analyzes One Cell at a Time
                  5. Linking Enzyme Sequence to Function
                  6. Second Function Found for Cell-Cycle Regulatory Protein
                  7. Mitochondrial Protein Also Helps Cells Fend off Viruses
                  8. Modified E. Coli Make Human Glycoproteins
                  9. Signalling Protein Acts in Nucleus; Not Just in Cytoplasm
                  10. SMS Nanoprobe Could Lead to Better Diagnosis; Drug Design
        3. Assessment of Innovation in Europe
                  1. Companies
                  2. Additional Companies
                  3. Government and Academic Research Institutions
        4. Assessment of Innovation in the Asia Pacific Region
                  1. Companies
                  2. Government and Academic Research Institutions
 
6. Patents and Contacts
        1. Patents
                  1. Patents
        2. Contacts
                  1. Contacts
 
7. Decision Support Database
        1. R&D Expenditure
                  1. Pharmaceutical R&D Expenditure--World (2002 to 2012)
                  2. Percentage of Pharmaceutical R&D Expenditure--World (2002 to 2012)
        2. Biotechnology Investment
                  1. Government Investment in Biotech R&D--World (2002 to 2012)
                  2. Venture Capital Investment in Biotech R&D--World (2002 to 2012)

Abstract

Research Overview

This Frost & Sullivan research service titled Functional Proteomics provides an overview of enabling technologies in functional proteomics, along with a complete analysis of key market drivers, restraints, applications, and trends that are impacting the field. In this study, Frost & Sullivan's expert analysts thoroughly examine the following applications: drug discovery, biomarkers, molecular diagnostics and antibody therapies, enabling technologies, spectometry, microarrays, electrophoresis, immunohistochemistry, yeast and viral expression and identification, affinity chromatography, and immunohistochemistry.

Market Sectors

Expert Frost & Sullivan analysts thoroughly examine the following market sectors in this research:
  • Drug discovery
  • Biomarker identification
  • Molecular diagnostics
  • Antibody therapies
Technologies

The following technologies are covered in this research:
  • 2D gel electrophoresis
  • Spectrometry
  • NMR
  • Surface plasmon resonance
  • Phage display
  • Yeast 2-hybrid systems
  • Bioinformatics microarrays
  • Immunohistochemistry
  • Affinity chromatography
  • Sample preparation
Technology Overview

Development of Proteomics Leads to Success for Functional Proteomics

Despite various technological advancements, sequencing of the human genome has helped in identifying only a fraction of the proteins and genes implicated in diseases. Recent advances in functional proteomics technologies are helping researchers achieve a greater understanding of the role of protein-protein interactions and networks in disease. "For example, a new sample-preparation technique reduces protein preparation time from 18 hours to 15 minutes," notes the analyst of the study. "Protein microarray fabrication, once cumbersome and limited, will soon allow arraying of as many as 10,000 spots on a single chip." A nanospray platform for high-throughput mass spectrometry allows the analysis of complex protein mixtures, such as those found in human serum, to be miniaturized and accelerated. These critical technological advancements boost the image of proteomics.

Proteomics research is growing very fast. Nearly every major biotech and pharmaceuticals firm has now set up a proteomics program. Proteomics has been instrumental in discovery of ’biomarkers’, cellular molecules that are associated with the presence of a particular disease. Researchers previously assumed that proteins were isolated entities, acting independently of surrounding proteins. Today, we know that numerous cellular processes, controlled and carried out by proteins, are not the result of individual protein actions but by protein "machines", or aggregates of many different proteins.

Targeting Specific Diseases Possible Through Functional Proteomics

Protein-protein interactions are not only one-to-one or pair-wise interactions. Sometimes, as many as 50 proteins can interact to form one large complex protein. These types of interactions make attractive drug targets for the pharmaceuticals and biotechnology industry. Protein-protein interactions are important in investigating intercellular and intracellular signaling pathways. For example, signals transmitted from the exterior of a cell to the inside by protein-protein interactions of the signaling molecules, traverse through receptors, and protein kinase cascades. Signaling pathways regulate cellular characteristics and processes such as physiology, proliferation, change in shape and motility, differentiation, adhesion, and intercellular interactions.

Protein-protein interactions are thought to be responsible for the development of pathological processes such as prion diseases and Alzheimer's disease. These interactions demonstrate great potential as new targets for novel drugs. "Apart from basic research, the primary and certainly most potentially profitable application for functional proteomics research is drug discovery and development," notes the analyst. "Functional proteomics can help in target identification and target validation. The hope is that this will ultimately lead to new drugs that target specific diseases."

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