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Post Genome Project Era Proteomics R&D Competition

Published by: Fuji-Keizai USA, Inc.

Published: Jan. 1, 2003 - 159 Pages


Table of Contents


1.Executive Overview

2.The Market Overview For Proteomics In Pharmaceutical R&D

Definition Of Proteomics Market

Recent Industry Trends That Impact Proteomics Market

3.Current Proteomics Market Participants By Market Segment

Technologies Used In Proteomics

Emerging Proteomics Technologies

Proteomics Chip Providers

Proteomics Platform Providers

Reagent Or Antibody Providers

Proteomics Informatics Tools And Database Providers

Proteomic Service Providers

Proteomics-Based Drug Discovery Companies

The Drug Development Process

4.Drivers Of Proteomics Market

Pharmaceutical Drug Discovery R&D

Japan To Play Key Role In 'Golden Age Of Discovery

Genomics Contribution To Drug Development

Need For Systems Approach To Biological Research

Limitations Of Dna Chips And Expression Profiling

Technical Challenges With Protein Chips

Post Human Genome Project Era Proteomics Databases

5.Case Studies In Proteomic Platforms For Pharmaceutical R&D

Collaborative Landscape In Proteomics: Strategic Alliances And Partnerships

Strategic Alliances In The Proteomics Market Segments

Alliances With Platform Providers

Alliances With Proteomics Arrays Or Protein Chips

Alliances With Informatics And Database Providers

Alliances With Proteomic Reagent Providers

Alliances With Proteomic Service Providers

Recent Key Strategic Alliances And Partnerships

Applied Biosystems & Hts Biosystems: An R&D And Marketing Collaboration

Bruker Daltonics & Roche: Platform Development Collaboration

Celera & Somalogic: Technology Access Collaboration

Ciphergen & Beckman Coulter: Robotic Upgrade To Leading Platform

Correlogic & Ciphergen: Diagnostic Discovery Collaboration

Gyros & Affibody: Technology Development Strategic Alliance

Mds Proteomics & Thermo Finnigan: Platform Development Collaboration

Neogenesis & Mass General Hospital: Clinical Collaboration

Phylos & Upstate: Reagent Development Collaboration

Large Scale Biology & Niehs: Academic Research Collaboration

Oxford Glycosciences & Bioinvent: Drug-Discovery Collaboration

Proteome Systems & Itochu: An International Joint Venture

6.Drug Discovery Pipeline Engaging Proteomics

7.Future Outlook For Proteomics Market

Forecast For Proteomics By Market Segments

Platform Provider Market Segment

Protein Chip Provider Segment

Informatics Provider Market Segment

Reagent Provider Market Segment

Services Provider Market Segment

Comparison Of The Market Segment Forecasts

Proteomics Market Size By Segment, 2002~2006

Total Size Of The Proteomics Market

8.Future Directions In Proteomics

Overview Of Past Trends

Recent Developments In Genomics That Impact Proteomics

Indicators Of Future Trends In Proteomics

9.Company Profiles

Protein Chip Providers

Aspira Biosystems

Bioforce Nanosciences

Biosite Discovery

Glaucus Proteomics

Milagen, Inc.

Phylos

Protometrix

Platform Providers

20/20 Genesystems, Inc

Agilent Technologies

Applied Biosystems

Biacore Ab

Ciphergen

Combimatrix

Hts Biosystems

Kinexus

Large Scale Biology

Perkin-Elmer, Inc.

Prolinx

Proteome Systems Ltd.

Randox

Somalogic

Zeptosens

Zyomyx, Inc.

Reagent Providers

Bioinvent

Cambridge Antibody Technology

Lynx

Upstate

Services Providers

Affinium Pharmaceuticals

Geneprot

Protagen Ag

Syrrx

Informatics And Database Providers

Axcell Biosciences

Compugen

Geneformatics

Informax

Iconix Pharmaceuticals

Labvantage Solutions

Matrix Science

Nonlinear Dynamics

Proteometrics

Proteomics-Based Drug Discovery Companies

Ace Biosciences

Archemix

Beyond Genomics

Celera Genomics

Mds Proteomics, Inc.

Neogenesis Pharmaceuticals, Inc.

Oxford Glycosciences

10.Lessons Learned And Emerging Opportunities

Genomics Companies Restructure And Focus On Proteomics

Challenges Of Drug Discovery R&D Process

Next Hot Development Areas In Proteomics

Proteomics Opportunities

Role In Drug Discovery

Role In Toxicology And Toxicogenomics

Role In Basic Research

Large-Scale Proteomics Takes Off

11.Summary

Appendix A - Listing Of Proteomics Vendors

Appendix B - Proteomics Glossary

2d-Gel Electrophoresis

Activity Based Proteomics

Antibody Chips

Carbohydrate Chips

Cell Chips/ Microarrays

Cell-Based Drug Discovery

Cellular Proteome

Chemical Chips/ Microarrays

Chemical Genetics

Chemical Proteomics

Computational Proteomics

Compound Validation

Functional Proteomics

Functional Protein Arrays

High-Throughput Proteomics

Human Proteome Organization (HUPO)

Human Proteomics Initiative

In Silico Proteomics

Medicinal Chemistry

Physiological Proteomics

Protein-DNA Interaction Methods

Protein Chips

Proteomics

Structural Chemogenomics

Suspension Arrays

Tissue Biochips/Microarrays

Toxicogenomics

Abstract

Proteomics is projected to grow from a $565 million market in 2001 to over $3.3 billion in 2006. This represents an average annual rate of growth of over 40%. The fastest growing segment of the proteomics market is expected to be the protein chip segment that will increase from $65.7 million in 2001 to over $723 million in 2006. This represents a 11-fold increase in market size in a six-year period and an average annual growth rate approaching 62%. Demand for proteomics services is expected to be strong throughout this time period with an average annual growth rate of over 50%. The rate of growth in this market segment is expected to slow after 2004 when next generation proteomics platforms are introduced. The proteomics platform market segment will remain the largest with a growth from $311 million in 2001 to approximately $1.7 billion in 2006.

Following the release of the first full draft of the human genome, the spotlight in biomedical research is shifting from genomics to proteomics as the key technology to transform information into pharmaceutical products. The need to improve the speed and efficiency of drug discovery is the primary driver of proteomics. Current step-wise screening and chemical optimization methods are both time-consuming (averaging 10-12 years from discovery to market) and expensive (estimated costs range from $500M-$750M). In addition, there is a high rate of failure in the clinical trials process due to toxicity or low efficacy of selected drug targets resulting in an increased interest in identification of biomarkers suitable to use in therapeutic planning and individualized medicine. It is hoped that both the rate of drug development and the rate of discovery of novel, informative biomarkers will dramatically improve using emerging proteomics platforms.

The use of proteomics capabilities has the potential to decrease overall spending per new chemical compound by approximately 30%, while decreasing the time investment by two years. The reality is that genomic technologies (use of DNA arrays and mRNA profiling) have resulted in a bottleneck in target validation. In order to realize the potential for efficiency, both genomics and proteomics need to be leveraged by applying these tools throughout validation to result in suitable and validated targets. This will require the construction of a systems biology framework to understand on a molecular level the disease mechanisms that often involve multiple targets and pathways.

All major pharmaceutical companies are searching for ways of accelerating drug discoveries. An important strategy to increase efficiency and reduce attrition in discovery is the ability to develop new drugs in parallel with disease biomarkers. With decreasing numbers of drugs in the clinical pipeline, Pharma (the pharmaceutical industry) is actively evaluating methods to increase the return on their R&D dollars by raising R&D productivity. Proteomics offers a clearer path toward this than genomics for several reasons. First, the same proteomics platforms can be used to test multiple biochemical properties. When the same target screen positive in multiple tests, it increases confidence in the role of that target in the disease of interest. Second, proteomics targets the biomolecules responsible for disease directly while genomics measures the levels of the messages encoding them, an indirect measurement of correlation. Third, proteomics platforms that are used in R&D for discovering drug targets can also be used in upstream in both pre-clinical R&D and post-clinical development. For example, the same tests on proteomic chips are being applied to in drug discovery, target validation, biomarker studies and drug candidate evaluation. Similarly, the hybrid sample preparation/MS analysis platforms under active development by several proteomics platform providers can be used both in discovery and in screening all the way through manufacturing QC to test product purity.

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