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Retinoids : An A-Z Guide To Their Biology, Therapeutic Opportunities & Pharmaceutical Development

Published by: LeadDiscovery

Published: Feb. 1, 2003



Table of Contents



Background

A (very) early history of the retinoids

From liver to “fat soluble factor A”

Identification and early functional characterization of vitamin A

Basic retinoid metabolism

Vision and the retinoids

Bioavailability of retinol

Intestinal absorption of retinol

Retinyl ester formation

Retinoids mobilization, storage and delivery

Retinyl esters and chylomicrons

Retinyl ester uptake by the liver

Retinyl ester hydrolysis in the liver

Bile-salt-dependent retinyl ester hydrolase (carboxylester lipase)

Bile-salt-independent retinyl ester hydrolases

Retinyl ester storage in the stellate cells of the liver

Retinoids delivery to and between target cells

Retinyl esters and chylomicrons

Retinol and plasma retinol-binding protein

b-Carotene and retinyl esters and plasma lipoproteins

Retinoic acid and albumin

The interphotoreceptor (or interstitial) retinol-binding protein (IRBP)

The epididymus retinoic-acid binding protein (E-RABP)

Cellular retinoid-binding proteins

The cellular retinol-binding proteins (CRBPs)

The cellular retinoic-acid-binding proteins (CRABPs)

The cellular retinaldehyde-binding protein (CRALBP)

Retinoic acid

Retinoic acid biosynthesis

The early ideas

The alcohol dehydrogenase family

The short-chain dehydrogenase/reductase family

The aldehyde dehydrogenase family

The cytochrome P450-dependent monooxygenases

Retinoic acid and beyond

Retinoic acid catabolism

The retinoid receptors

The nuclear receptors

The retinoid receptors

The retinoic acid receptors

The retinoid X receptors

The RARs and RXRs as nuclear receptors

Synthetic retinoids

The retinoids and transcriptional activation
The retinoids response elements

Autoregulation of retinoid signaling

Dimerization for activation

RXR/RAR heterodimers

RXR homodimers

Further RXR heterodimers

Specificity within RXR/RAR heterodimers

Structural determinants for dimerization

Co-regulators and transcriptional activation

General transcription factors

Pre-initiation complex assembly

Further transcriptional processes

Initiation

Promoter clearance

Transcript elongation

Transcriptional termination

Non-nuclear-receptor transcriptional co-regulators

Nuclear receptor co-activators

Nuclear receptor co-repressors

General co-regulator considerations

The retinoids and cancer chemoprevention

General introduction

Statistical information on incidence of major cancers

Treatment options for major cancers

The retinoids connection

The retinoids and cancers

Skin cancer

Oral cancers

Head and neck cancers

Breast cancer

Lung cancer

Pancreas cancer

Liver cancer

Prostate cancer

Bladder cancer

Colorectal cancer

Renal cancer

Ovarian cancer

Thyroid cancer

Blood cancers

Some specific mechanisms behind retinoid action

Retinoid receptor co-regulator recruitment: further structural considerations

The retinoic acid receptor b (RARb)

The transcription factor AP-1

Apoptosis, 4-HPR, and CD437

PPARg/RXR in diet-induced obesity and type 2 diabetes

Research tools

Reference retinoids used in research

Methodologies

An overview of current development activity

Profiles of molecules developed as regulators of retinoid acid biology including

adapalene (CD271)

AGN-194310

AGN-195183

alitretinoin (9-cis-retinoic acid)

bexarotene (Tagretin, LG-1069)

etretinate (Tigason, Ro 10-9359)

fenretinide (4-HPR)

isotretinoin (13-cis-retinoic acid)

LGD-1550

MDI-101

MDI-301

MDI-403

motretinide (Ro 11-1430)

PLT-99257

PLT-99511

R-667

rambazole

RARß2 gene therapy

tazarotene (AGN-190168)

tocoretinate

tretinoin (all-trans-retinoic acid, vitamin A acid)

UAB-30

Companies involved in retinoid biology

Abstract

The retinoids play a key role in differentiation, proliferation and apoptosis and as a result over 30 naturally occurring and synthetic analogs of retinoic acid are now either in development or on the market. Retinoids in current use are effective in only a small number of cancers as well as acne and psoriasis. Extending this benefit to other types of cancer as well as newer indications such as diabetes and airway inflammation has represented a hurdle that will only be fully overcome by taking into account the biology of the retinoids. LeadDiscovery’s "Retinoids: An A-Z guide to their biology, therapeutic opportunities & pharmaceutical development" represents one of the most comprehensive insights into the retinoid field published in recent years. The aim of this report is to bring the reader up to date with advances in this area, pharmaceutical activity relating to retinoid development and strategies that will lead to the identification of improved retinoids.

Available retinoids are effective in treating acne and psoriasis. Likewise the retinoids are also beneficial in the treatment of acute promyelocytic leukemia, skin cancer, Kaposi's sarcoma and cutaneous T cell lymphoma. This has led to the launch of Ligand Pharmaceuticals' three marketed retinoids Tagretin gel, Tagretin capsules and Panretin which are indicated for T cell lymphoma or Kaposi's sarcoma. Although the incidence of these cancers is relatively low Ligand's retinoids generated sales of $57 million in 2002.

Although numerous cancers are associated with alterations in retinoid biology, clinical efficacy of retinoids has been limited - understanding why, and how this "resistance" can be overcome therefore represents a major goal in oncology. Meeting this goal will extend the therapeutic benefit of the retinoids to other major cancers as well as other newer indications for the retinoids such as diabetes and COPD. These advances would be attractive both clinically and commercially.

Early clinical studies and retinoid development commenced without an understanding of retinoid molecular biology. It is now clear that the actions of these molecules are, in almost all cases, via their nuclear receptors, whereby they are able to impinge on the expression of multiple genes. It is therefore not surprising that a "shotgun" approach to the retinoids has generally produced disappointing results in the clinic.

"Retinoids : An A-Z guide to their biology, therapeutic opportunities & pharmaceutical development" takes the reader on a journey through the various field of retinoid biology and is designed to offer an insight into how the retinoids confer specificity under physiological conditions; the pathophysiology of the retinoids; and pharmaceutical strategies that may increase the therapeutic benefits of the retinoids. In particular the report overviews
  • biochemical and cellular pathways controlling retinoid uptake
  • retinoid synthesis and metabolism
  • the biology of the various proteins that shuttle the retinoids from cell to cell and onwards to their site of action
  • the various retinoid nuclear receptor complexes their ligands and their interaction with the genome
  • modulation of nuclear receptor-conferred control of transcription by co-repressors and co-activators
  • the role of the retinoids in the pathophysiology of cancer as well as animal and clinical data surrounding the therapeutic use of the retinoids
  • retinoids in development or on the market
One of the main focusses of this report is the regulation of gene expression by nuclear receptor dimers and how plasticity has evolved within this system. The RXR receptor has emerged as a key binding partner, forming dimers with RAR receptors as well as members of the other nuclear receptor families. Each dimer is able to bind a specific set of DNA response elements, and the multiplicity of isoforms and splice variants of each receptor therefore introduces a basic level of plasticity. Therefore during the drug development process one is faced with the choice of advancing molecules with mixed or selective activity. Since a large number of receptor subtypes exist, it is possible to adopt the middle ground - for example, Allergan have developed Tazarotene, which was the first of a new generation of receptor-selective retinoids targeting RARb and RARg.

The make-up of a particular dimer not only determines which genes it can influence, but it also determines which of the many co-regulatory molecules it may bind. Paralleling the "histone code" the large number of possible dimer/co-regulatory complexes adds a further level of plasticity, through what has been termed the "co-factor code". Challenges of the future will include the selection of gene targets and the identification of dimer-co-regulatory complex(es) that play a role in the control of these genes. This report provides a full inventory of known co-regulatory molecules. Advances in genomics are allowing gene expression profiles to be identified for particular disease states and gene targeting is already aiding the drug development process. It is now hoped that the identification of dimer/co-regulatory complexes able to regulate the expression of these target genes will soon become a common feature of therapeutic development.

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